Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 52_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1279593 bp
Thymine Count
1283389 bp
Guanine Count
1320483 bp
Cytosine Count
1307343 bp
Genome Length
5200701 bp
Protein-coding Genes
4728 genes
Non-Coding Genes
404 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf494 domain-containing protein | EPT01_19680 | Not Available | Negative | 4001489 - 4001962 | 18511.2 |
| dna-protecting protein dpra | EPT01_19685 | Not Available | Negative | 4001934 - 4003058 | 40957.3 |
| peptide deformylase | EPT01_19690 | Not Available | Positive | 4003188 - 4003697 | 19329.6 |
| methionyl-trna formyltransferase | EPT01_19695 | Not Available | Positive | 4003712 - 4004659 | 34170.4 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | EPT01_19700 | Not Available | Positive | 4004705 - 4005994 | 48350.3 |
| trk system potassium transporter trka | EPT01_19705 | Not Available | Positive | 4006016 - 4007392 | 50370.8 |
| large-conductance mechanosensitive channel protein mscl | EPT01_19710 | Not Available | Positive | 4007522 - 4007932 | 14957.7 |
| alternative ribosome-rescue factor a | EPT01_19715 | Not Available | Negative | 4007929 - 4008147 | 8171.86 |
| zn(2+)-responsive transcriptional regulator | EPT01_19720 | Not Available | Negative | 4008203 - 4008628 | 16180.4 |
| duf1992 domain-containing protein | EPT01_19725 | Not Available | Negative | 4008639 - 4009007 | 13945.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





