Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 52_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1279593 bp
Thymine Count
1283389 bp
Guanine Count
1320483 bp
Cytosine Count
1307343 bp
Genome Length
5200701 bp
Protein-coding Genes
4728 genes
Non-Coding Genes
404 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | EPT01_17375 | Not Available | Negative | 3531015 - 3532148 | 42062.4 |
| abc transporter atp-binding protein | EPT01_17380 | Not Available | Negative | 3532141 - 3533877 | 63136.3 |
| secretion protein hlyd | EPT01_17385 | Not Available | Negative | 3533870 - 3534865 | 36287.7 |
| dna-binding transcriptional regulator cecr | EPT01_17390 | Not Available | Negative | 3534868 - 3535539 | 25018.1 |
| atp-dependent rna helicase rhle | EPT01_17395 | Not Available | Positive | 3535768 - 3537132 | 49992.4 |
| atp-dependent dna helicase ding | EPT01_17405 | Not Available | Positive | 3537965 - 3540115 | 81459.0 |
| dna-binding protein ybib | EPT01_17410 | Not Available | Positive | 3540143 - 3541105 | 35050.7 |
| malate/lactate/ureidoglycolate dehydrogenase | EPT01_17415 | Not Available | Positive | 3541246 - 3542331 | 38899.3 |
| duf1471 domain-containing protein | EPT01_17420 | Not Available | Negative | 3542560 - 3542820 | 8568.2 |
| dksa/trar family c4-type zinc finger protein | EPT01_17425 | Not Available | Negative | 3543085 - 3543351 | 9756.33 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





