Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 52_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1279593 bp
Thymine Count
1283389 bp
Guanine Count
1320483 bp
Cytosine Count
1307343 bp
Genome Length
5200701 bp
Protein-coding Genes
4728 genes
Non-Coding Genes
404 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flap endonuclease xni | EPT01_16965 | Not Available | Negative | 3442196 - 3442951 | 28167.7 |
| l-serine dehydratase 2 | EPT01_16970 | Not Available | Negative | 3443063 - 3444430 | 48755.8 |
| haaap family serine/threonine permease | EPT01_16975 | Not Available | Negative | 3444488 - 3445777 | 46909.2 |
| log family protein | EPT01_16980 | Not Available | Negative | 3446334 - 3447698 | 50975.0 |
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | EPT01_16985 | Not Available | Negative | 3447810 - 3448658 | 32589.3 |
| secy-interacting protein | EPT01_16990 | Not Available | Positive | 3448726 - 3449271 | 20709.6 |
| yqcc family protein | EPT01_16995 | Not Available | Positive | 3449893 - 3450222 | 12787.2 |
| trna pseudouridine(65) synthase truc | EPT01_17000 | Not Available | Positive | 3450222 - 3451004 | 29667.5 |
| flavodoxin | EPT01_17005 | Not Available | Positive | 3451022 - 3451471 | 16275.1 |
| mfs transporter | EPT01_17010 | Not Available | Positive | 3451906 - 3453258 | 49145.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





