Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 52_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1279593 bp
Thymine Count
1283389 bp
Guanine Count
1320483 bp
Cytosine Count
1307343 bp
Genome Length
5200701 bp
Protein-coding Genes
4728 genes
Non-Coding Genes
404 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional murein dd-endopeptidase/murein ld-carboxypeptidase | EPT01_16550 | Not Available | Positive | 3357422 - 3357988 | 21041.1 |
| cyclic di-gmp phosphodiesterase | EPT01_16555 | Not Available | Positive | 3358169 - 3359725 | 58591.5 |
| abc transporter substrate-binding protein | EPT01_16560 | Not Available | Positive | 3359807 - 3361621 | 69672.6 |
| abc transporter permease | EPT01_16565 | Not Available | Positive | 3361622 - 3362716 | 40362.6 |
| abc transporter permease | EPT01_16570 | Not Available | Positive | 3362716 - 3363741 | 38094.6 |
| nickel-responsive transcriptional regulator nikr | EPT01_16580 | Not Available | Negative | 3364360 - 3364761 | 15094.7 |
| nickel import atp-binding protein nike | EPT01_16585 | Not Available | Negative | 3364767 - 3365573 | 29792.7 |
| nickel import atp-binding protein nikd | EPT01_16590 | Not Available | Negative | 3365570 - 3366334 | 26822.1 |
| nickel abc transporter permease subunit nikc | EPT01_16595 | Not Available | Negative | 3366334 - 3367167 | 30363.8 |
| nickel abc transporter permease subunit nikb | EPT01_16600 | Not Available | Negative | 3367164 - 3368108 | 35250.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





