Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 52_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1279593 bp
Thymine Count
1283389 bp
Guanine Count
1320483 bp
Cytosine Count
1307343 bp
Genome Length
5200701 bp
Protein-coding Genes
4728 genes
Non-Coding Genes
404 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yip1 family protein | EPT01_16345 | Not Available | Negative | 3312479 - 3313066 | 21692.0 |
| deda family protein | EPT01_16350 | Not Available | Positive | 3313236 - 3313814 | 21445.9 |
| sdr family oxidoreductase | EPT01_16355 | Not Available | Negative | 3313944 - 3314705 | 26952.4 |
| multidrug resistance outer membrane protein mdtq | EPT01_16360 | Not Available | Negative | 3314758 - 3316284 | 55608.2 |
| protein yohp | EPT01_16365 | Not Available | Positive | 3316418 - 3316501 | 3092.28 |
| trna dihydrouridine(16) synthase dusc | EPT01_16370 | Not Available | Negative | 3316874 - 3317821 | 35201.5 |
| hypothetical protein | EPT01_16375 | Not Available | Positive | 3318060 - 3318458 | 14579.6 |
| cidb/lrgb family autolysis modulator | EPT01_16380 | Not Available | Positive | 3318455 - 3319150 | 24471.1 |
| cytidine deaminase | EPT01_16385 | Not Available | Positive | 3319280 - 3320164 | 31541.6 |
| outer membrane permeability protein sana | EPT01_16390 | Not Available | Positive | 3320314 - 3321033 | 27288.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





