Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 52_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1279593 bp
Thymine Count
1283389 bp
Guanine Count
1320483 bp
Cytosine Count
1307343 bp
Genome Length
5200701 bp
Protein-coding Genes
4728 genes
Non-Coding Genes
404 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-tetrahydrodipicolinate synthase | EPT01_15155 | Not Available | Positive | 3083769 - 3084647 | 31271.8 |
| outer membrane protein assembly factor bamc | EPT01_15160 | Not Available | Positive | 3084664 - 3085698 | 36844.5 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | EPT01_15165 | Not Available | Positive | 3085911 - 3086624 | 26996.5 |
| neutral zinc metallopeptidase | EPT01_15170 | Not Available | Positive | 3086792 - 3087655 | 31462.0 |
| trna cytosine(34) acetyltransferase tmca | EPT01_15175 | Not Available | Positive | 3087670 - 3089685 | 74896.7 |
| esterase | EPT01_15180 | Not Available | Positive | 3089759 - 3090457 | 24856.5 |
| ypfn family protein | EPT01_15185 | Not Available | Negative | 3090567 - 3090767 | 8071.78 |
| succinyl-diaminopimelate desuccinylase | EPT01_15190 | Not Available | Negative | 3090795 - 3091922 | 41271.4 |
| arsc family reductase | EPT01_15195 | Not Available | Negative | 3091926 - 3092282 | 13601.3 |
| hypothetical protein | EPT01_15200 | Not Available | Positive | 3092663 - 3092722 | 2408.02 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





