Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 52_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1279593 bp
Thymine Count
1283389 bp
Guanine Count
1320483 bp
Cytosine Count
1307343 bp
Genome Length
5200701 bp
Protein-coding Genes
4728 genes
Non-Coding Genes
404 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class ii glutamine amidotransferase | EPT01_14570 | Not Available | Positive | 2974567 - 2975334 | 28637.2 |
| murein l,d-transpeptidase | EPT01_14575 | Not Available | Negative | 2975305 - 2976045 | 28022.8 |
| type ii toxin-antitoxin system mrna interferase toxin yafq | EPT01_14580 | Not Available | Negative | 2976201 - 2976479 | 10877.3 |
| type ii toxin-antitoxin system antitoxin dinj | EPT01_14585 | Not Available | Negative | 2976482 - 2976742 | 9406.33 |
| peptidoglycan endopeptidase | EPT01_14590 | Not Available | Positive | 2976952 - 2977701 | 28786.4 |
| transposase | EPT01_14595 | Not Available | Positive | 2977877 - 2978374 | 20042.8 |
| flagellar type iii secretion system protein flha | EPT01_14600 | Not Available | Negative | 2978598 - 2980337 | 63157.0 |
| putative lateral flagellar export/assembly protein lafu | EPT01_14605 | Not Available | Positive | 2980297 - 2981067 | 28339.1 |
| dna polymerase iv | EPT01_14610 | Not Available | Positive | 2981138 - 2982193 | 39518.2 |
| type i toxin-antitoxin system antitoxin yafn | EPT01_14615 | Not Available | Positive | 2982245 - 2982538 | 11234.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





