Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 52_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1279593 bp
Thymine Count
1283389 bp
Guanine Count
1320483 bp
Cytosine Count
1307343 bp
Genome Length
5200701 bp
Protein-coding Genes
4728 genes
Non-Coding Genes
404 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system atpase tssh | EPT01_14470 | Not Available | Negative | 2947504 - 2950269 | 100993.0 |
| dotu family type iv/vi secretion system protein | EPT01_14475 | Not Available | Negative | 2950278 - 2951039 | 29350.7 |
| type vi secretion system baseplate subunit tssk | EPT01_14480 | Not Available | Negative | 2951044 - 2952375 | 49936.8 |
| type vi secretion system lipoprotein tssj | EPT01_14485 | Not Available | Negative | 2952378 - 2952902 | 19395.0 |
| type vi secretion system-associated fha domain protein tagh | EPT01_14490 | Not Available | Negative | 2952899 - 2954179 | 47390.8 |
| type vi secretion system baseplate subunit tssg | EPT01_14495 | Not Available | Negative | 2954204 - 2955286 | 40262.1 |
| type vi secretion system baseplate subunit tssf | EPT01_14500 | Not Available | Negative | 2955250 - 2957100 | 71220.0 |
| type vi secretion system baseplate subunit tsse | EPT01_14505 | Not Available | Negative | 2957104 - 2957517 | 15522.1 |
| type vi secretion system contractile sheath large subunit | EPT01_14510 | Not Available | Negative | 2957524 - 2958999 | 55733.1 |
| hypothetical protein | EPT01_14515 | Not Available | Negative | 2959050 - 2959274 | 8396.04 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





