Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 52_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1279593 bp
Thymine Count
1283389 bp
Guanine Count
1320483 bp
Cytosine Count
1307343 bp
Genome Length
5200701 bp
Protein-coding Genes
4728 genes
Non-Coding Genes
404 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mmcq/yjbr family dna-binding protein | EPT01_13395 | Not Available | Positive | 2708459 - 2708815 | 13520.2 |
| excinuclease abc subunit uvra | EPT01_13400 | Not Available | Negative | 2708850 - 2711672 | 103874.0 |
| single-stranded dna-binding protein ssb1 | EPT01_13405 | Not Available | Positive | 2711926 - 2712462 | 18976.1 |
| hypothetical protein | EPT01_13410 | Not Available | Negative | 2712561 - 2712842 | 10304.0 |
| c-di-gmp phosphodiesterase pdec | EPT01_13415 | Not Available | Positive | 2713272 - 2714858 | 60790.8 |
| superoxide response transcriptional regulator soxs | EPT01_13420 | Not Available | Negative | 2714861 - 2715184 | 12911.6 |
| redox-sensitive transcriptional activator soxr | EPT01_13425 | Not Available | Positive | 2715270 - 2715734 | 17150.7 |
| ncs2 family permease | EPT01_13430 | Not Available | Positive | 2716280 - 2717629 | 45714.4 |
| na+/h+ antiporter | EPT01_13435 | Not Available | Positive | 2717780 - 2719429 | 60527.5 |
| pentapeptide repeat-containing protein | EPT01_13440 | Not Available | Negative | 2719583 - 2720875 | 49266.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





