Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 52_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1279593 bp
Thymine Count
1283389 bp
Guanine Count
1320483 bp
Cytosine Count
1307343 bp
Genome Length
5200701 bp
Protein-coding Genes
4728 genes
Non-Coding Genes
404 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna 5-hydroxycytidine c2501 synthase | EPT01_13030 | Not Available | Positive | 2627418 - 2629379 | 72705.9 |
| duf2554 family protein | EPT01_13035 | Not Available | Negative | 2629471 - 2629701 | 8709.32 |
| type ii toxin-antitoxin system hica family toxin | EPT01_13040 | Not Available | Positive | 2629923 - 2630099 | 6782.3 |
| type ii toxin-antitoxin system antitoxin hicb | EPT01_13045 | Not Available | Positive | 2630145 - 2630561 | 15247.5 |
| plp-dependent aminotransferase family protein | EPT01_13050 | Not Available | Positive | 2630640 - 2632046 | 52795.8 |
| extracellular solute-binding protein | EPT01_13055 | Not Available | Positive | 2632291 - 2633436 | 42297.4 |
| abc transporter atp-binding protein | EPT01_13060 | Not Available | Positive | 2633454 - 2634467 | 37058.9 |
| abc transporter permease | EPT01_13065 | Not Available | Positive | 2634468 - 2635409 | 34422.2 |
| abc transporter permease | EPT01_13070 | Not Available | Positive | 2635399 - 2636193 | 28739.6 |
| aminobutyraldehyde dehydrogenase | EPT01_13075 | Not Available | Positive | 2636215 - 2637639 | 50862.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





