Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 52_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1279593 bp
Thymine Count
1283389 bp
Guanine Count
1320483 bp
Cytosine Count
1307343 bp
Genome Length
5200701 bp
Protein-coding Genes
4728 genes
Non-Coding Genes
404 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heat shock protein hslj | EPT01_12760 | Not Available | Negative | 2564515 - 2564937 | 15238.6 |
| d-lactate dehydrogenase | EPT01_12765 | Not Available | Negative | 2565048 - 2566037 | 36536.9 |
| ydbh family protein | EPT01_12770 | Not Available | Positive | 2566245 - 2568884 | 96822.2 |
| ynbe family lipoprotein | EPT01_12775 | Not Available | Positive | 2568881 - 2569066 | 6840.53 |
| duf1318 domain-containing protein | EPT01_12780 | Not Available | Positive | 2569074 - 2569400 | 11878.5 |
| transcriptional regulator fear | EPT01_12785 | Not Available | Negative | 2569572 - 2570477 | 34608.3 |
| primary-amine oxidase | EPT01_12795 | Not Available | Negative | 2572272 - 2574545 | 84466.4 |
| phenylacetic acid degradation bifunctional protein paaz | EPT01_12800 | Not Available | Negative | 2574793 - 2576838 | 72992.8 |
| 1,2-phenylacetyl-coa epoxidase subunit a | EPT01_12805 | Not Available | Positive | 2577123 - 2578052 | 35501.2 |
| 1,2-phenylacetyl-coa epoxidase subunit b | EPT01_12810 | Not Available | Positive | 2578064 - 2578351 | 10942.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





