Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 52_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1279593 bp
Thymine Count
1283389 bp
Guanine Count
1320483 bp
Cytosine Count
1307343 bp
Genome Length
5200701 bp
Protein-coding Genes
4728 genes
Non-Coding Genes
404 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tail fiber protein | EPT01_12705 | Not Available | Positive | 2552941 - 2553546 | 20143.0 |
| tail fiber assembly protein | EPT01_12710 | Not Available | Positive | 2553546 - 2554130 | 21636.2 |
| iron/manganese abc transporter permease subunit sitd | EPT01_12720 | Not Available | Negative | 2554343 - 2555200 | 30634.8 |
| iron/manganese abc transporter permease subunit sitc | EPT01_12725 | Not Available | Negative | 2555197 - 2556054 | 30818.5 |
| iron/manganese abc transporter atp-binding protein sitb | EPT01_12730 | Not Available | Negative | 2556051 - 2556878 | 30057.4 |
| iron/manganese abc transporter substrate-binding protein sita | EPT01_12735 | Not Available | Negative | 2556878 - 2557792 | 33488.2 |
| universal stress protein uspf | EPT01_12740 | Not Available | Negative | 2558378 - 2558812 | 16017.4 |
| porin ompn | EPT01_12745 | Not Available | Negative | 2558953 - 2560086 | 41222.0 |
| pyruvate:ferredoxin (flavodoxin) oxidoreductase | EPT01_12750 | Not Available | Negative | 2560454 - 2563978 | 128860.0 |
| duf333 domain-containing protein | EPT01_12755 | Not Available | Positive | 2564252 - 2564518 | 8730.45 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





