Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 52_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1279593 bp
Thymine Count
1283389 bp
Guanine Count
1320483 bp
Cytosine Count
1307343 bp
Genome Length
5200701 bp
Protein-coding Genes
4728 genes
Non-Coding Genes
404 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellin flic | EPT01_11275 | Not Available | Positive | 2284991 - 2286703 | 58191.4 |
| rna polymerase sigma factor flia | EPT01_11280 | Not Available | Positive | 2287023 - 2287742 | 27522.8 |
| flagella biosynthesis regulatory protein fliz | EPT01_11285 | Not Available | Positive | 2287788 - 2288339 | 21571.9 |
| cystine abc transporter substrate-binding protein | EPT01_11290 | Not Available | Positive | 2288427 - 2289227 | 28996.8 |
| d-cysteine desulfhydrase | EPT01_11295 | Not Available | Positive | 2289332 - 2290318 | 35155.4 |
| amino acid abc transporter permease | EPT01_11300 | Not Available | Positive | 2290333 - 2291001 | 24802.7 |
| l-cystine abc transporter atp-binding protein yecc | EPT01_11305 | Not Available | Positive | 2290998 - 2291750 | 27707.8 |
| transcriptional regulator sdia | EPT01_11310 | Not Available | Positive | 2291980 - 2292702 | 28017.7 |
| duf2594 family protein | EPT01_11315 | Not Available | Negative | 2292770 - 2292994 | 8239.04 |
| hypothetical protein | EPT01_11320 | Not Available | Negative | 2292981 - 2293157 | 6720.31 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





