Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 52_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1279593 bp
Thymine Count
1283389 bp
Guanine Count
1320483 bp
Cytosine Count
1307343 bp
Genome Length
5200701 bp
Protein-coding Genes
4728 genes
Non-Coding Genes
404 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator h-ns | EPT01_10830 | Not Available | Negative | 2214589 - 2215002 | 15540.5 |
| thymidine kinase | EPT01_10835 | Not Available | Positive | 2215607 - 2216224 | 23457.9 |
| bifunctional acetaldehyde-coa/alcohol dehydrogenase | EPT01_10845 | Not Available | Negative | 2217526 - 2220201 | 96132.5 |
| naat family transporter yche | EPT01_10850 | Not Available | Positive | 2220678 - 2221325 | 23522.7 |
| oligopeptide abc transporter substrate-binding protein oppa | EPT01_10855 | Not Available | Positive | 2222063 - 2223694 | 60979.1 |
| oligopeptide abc transporter permease oppb | EPT01_10860 | Not Available | Positive | 2223780 - 2224700 | 33445.3 |
| oligopeptide abc transporter permease oppc | EPT01_10865 | Not Available | Positive | 2224715 - 2225623 | 33023.9 |
| abc transporter atp-binding protein | EPT01_10870 | Not Available | Positive | 2225635 - 2226648 | 37148.7 |
| abc transporter atp-binding protein | EPT01_10875 | Not Available | Positive | 2226645 - 2227649 | 37183.8 |
| duf440 family protein | EPT01_10880 | Not Available | Negative | 2227702 - 2228031 | 12687.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





