Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 52_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1279593 bp
Thymine Count
1283389 bp
Guanine Count
1320483 bp
Cytosine Count
1307343 bp
Genome Length
5200701 bp
Protein-coding Genes
4728 genes
Non-Coding Genes
404 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | EPT01_09530 | Not Available | Positive | 1960426 - 1961163 | 26018.1 |
| imidazole glycerol phosphate synthase subunit hisf | EPT01_09535 | Not Available | Positive | 1961145 - 1961921 | 28442.0 |
| bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisie | EPT01_09540 | Not Available | Positive | 1961915 - 1962526 | 22842.2 |
| hypothetical protein | EPT01_09545 | Not Available | Positive | 1962523 - 1962714 | 6878.22 |
| lps o-antigen chain length determinant protein wzzb | EPT01_09550 | Not Available | Negative | 1962623 - 1963600 | 36235.6 |
| nad-dependent epimerase | EPT01_09555 | Not Available | Positive | 1964026 - 1965030 | 37611.8 |
| is200/is605 family transposase | EPT01_09560 | Not Available | Negative | 1965154 - 1965612 | 18116.1 |
| udp-glucose 6-dehydrogenase | EPT01_09570 | Not Available | Negative | 1965768 - 1966934 | 43394.9 |
| nadp-dependent phosphogluconate dehydrogenase | EPT01_09575 | Not Available | Negative | 1967183 - 1968589 | 51438.1 |
| udp-glucose 4-epimerase gale | EPT01_09580 | Not Available | Negative | 1968694 - 1969704 | 37221.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





