Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 52_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1279593 bp
Thymine Count
1283389 bp
Guanine Count
1320483 bp
Cytosine Count
1307343 bp
Genome Length
5200701 bp
Protein-coding Genes
4728 genes
Non-Coding Genes
404 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yggs family pyridoxal phosphate-dependent enzyme | EPT01_09125 | Not Available | Positive | 1887529 - 1888233 | 25788.9 |
| yggt family protein | EPT01_09130 | Not Available | Positive | 1888251 - 1888817 | 21168.5 |
| yggu family protein | EPT01_09135 | Not Available | Positive | 1888814 - 1889104 | 10456.8 |
| rdgb/ham1 family non-canonical purine ntp pyrophosphatase | EPT01_09140 | Not Available | Positive | 1889112 - 1889705 | 21067.1 |
| radical sam family heme chaperone hemw | EPT01_09145 | Not Available | Positive | 1889698 - 1890834 | 42586.7 |
| duf1202 family protein | EPT01_09150 | Not Available | Negative | 1890989 - 1891996 | 38461.4 |
| l-asparaginase 2 | EPT01_09155 | Not Available | Negative | 1892113 - 1893159 | 36824.7 |
| duf2884 family protein | EPT01_09160 | Not Available | Negative | 1893335 - 1894054 | 26430.8 |
| duf469 domain-containing protein | EPT01_09165 | Not Available | Negative | 1894238 - 1894564 | 12881.2 |
| trna (guanosine(46)-n7)-methyltransferase trmb | EPT01_09170 | Not Available | Negative | 1894564 - 1895283 | 27308.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





