Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 52_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1279593 bp
Thymine Count
1283389 bp
Guanine Count
1320483 bp
Cytosine Count
1307343 bp
Genome Length
5200701 bp
Protein-coding Genes
4728 genes
Non-Coding Genes
404 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| citrate (pro-3s)-lyase subunit beta | EPT01_08255 | Not Available | Negative | 1710778 - 1711686 | 33111.6 |
| citrate lyase acyl carrier protein | EPT01_08260 | Not Available | Negative | 1711683 - 1711979 | 10689.9 |
| [citrate (pro-3s)-lyase] ligase | EPT01_08265 | Not Available | Negative | 1711994 - 1713052 | 40079.5 |
| sensor histidine kinase dpib | EPT01_08270 | Not Available | Positive | 1713431 - 1715089 | 61714.8 |
| two-component response regulator | EPT01_08275 | Not Available | Positive | 1715058 - 1715738 | 25454.9 |
| anaerobic c4-dicarboxylate transporter dcuc | EPT01_08280 | Not Available | Negative | 1715779 - 1717164 | 48415.3 |
| phospholipid:lipid a palmitoyltransferase | EPT01_08285 | Not Available | Positive | 1717753 - 1718313 | 21770.6 |
| cold shock-like protein cspe | EPT01_08290 | Not Available | Positive | 1718488 - 1718697 | 7463.84 |
| fluoride efflux transporter crcb | EPT01_08295 | Not Available | Negative | 1718751 - 1719134 | 13778.1 |
| deaminated glutathione amidase | EPT01_08300 | Not Available | Positive | 1719227 - 1720015 | 28683.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





