Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 52_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1279593 bp
Thymine Count
1283389 bp
Guanine Count
1320483 bp
Cytosine Count
1307343 bp
Genome Length
5200701 bp
Protein-coding Genes
4728 genes
Non-Coding Genes
404 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal recognition particle protein | EPT01_06980 | Not Available | Negative | 1439476 - 1440837 | 49790.5 |
| inner membrane protein ypjd | EPT01_06985 | Not Available | Positive | 1441004 - 1441795 | 29263.9 |
| duf21 domain-containing protein | EPT01_06990 | Not Available | Positive | 1441816 - 1443102 | 48047.2 |
| nucleotide exchange factor grpe | EPT01_06995 | Not Available | Negative | 1443157 - 1443750 | 21813.1 |
| molecular chaperone grpe | EPT01_07000 | Not Available | Negative | 1443747 - 1443941 | 7103.64 |
| nad(+) kinase | EPT01_07005 | Not Available | Positive | 1443873 - 1444751 | 32568.3 |
| dna repair protein recn | EPT01_07010 | Not Available | Positive | 1444837 - 1446498 | 61400.1 |
| outer membrane protein assembly factor bame | EPT01_07015 | Not Available | Positive | 1446647 - 1446988 | 12302.8 |
| rnfh family protein | EPT01_07020 | Not Available | Negative | 1447050 - 1447340 | 10790.0 |
| type ii toxin-antitoxin system rata family toxin | EPT01_07025 | Not Available | Negative | 1447330 - 1447806 | 17727.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





