Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 52_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1279593 bp
Thymine Count
1283389 bp
Guanine Count
1320483 bp
Cytosine Count
1307343 bp
Genome Length
5200701 bp
Protein-coding Genes
4728 genes
Non-Coding Genes
404 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | EPT01_06880 | Not Available | Positive | 1420279 - 1420965 | 24534.5 |
| abc transporter permease | EPT01_06885 | Not Available | Positive | 1420962 - 1423376 | 89337.5 |
| rhs repeat family protein | EPT01_06890 | Not Available | Positive | 1423807 - 1424450 | 22680.3 |
| atp-dependent chaperone clpb | EPT01_06895 | Not Available | Negative | 1424642 - 1427215 | 95590.8 |
| polyphenol oxidase | EPT01_06900 | Not Available | Negative | 1427345 - 1428076 | 26340.3 |
| 23s rrna pseudouridine(1911/1915/1917) synthase rlud | EPT01_06905 | Not Available | Negative | 1428073 - 1429053 | 37123.9 |
| outer membrane protein assembly factor bamd | EPT01_06910 | Not Available | Positive | 1429188 - 1429925 | 27830.9 |
| ribosome-associated translation inhibitor raia | EPT01_06915 | Not Available | Positive | 1430196 - 1430537 | 12785.3 |
| phe operon leader peptide | EPT01_06920 | Not Available | Positive | 1430641 - 1430688 | 1924.41 |
| bifunctional chorismate mutase/prephenate dehydratase | EPT01_06925 | Not Available | Positive | 1430787 - 1431947 | 43143.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





