Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 52_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1279593 bp
Thymine Count
1283389 bp
Guanine Count
1320483 bp
Cytosine Count
1307343 bp
Genome Length
5200701 bp
Protein-coding Genes
4728 genes
Non-Coding Genes
404 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine abc transporter substrate-binding protein hisj | EPT01_04995 | Not Available | Positive | 1024313 - 1025095 | 28484.9 |
| histidine abc transporter permease | EPT01_05000 | Not Available | Positive | 1025185 - 1025871 | 24650.8 |
| histidine abc transporter permease | EPT01_05005 | Not Available | Positive | 1025868 - 1026584 | 26871.3 |
| histidine abc transporter atp-binding protein hisp | EPT01_05010 | Not Available | Positive | 1026592 - 1027365 | 28654.8 |
| rpn family recombination-promoting nuclease/putative transposase | EPT01_05015 | Not Available | Positive | 1027562 - 1028452 | 34181.5 |
| tigr01777 family protein | EPT01_05020 | Not Available | Negative | 1028500 - 1029393 | 32811.9 |
| dihydroneopterin triphosphate 2'-epimerase | EPT01_05025 | Not Available | Negative | 1029414 - 1029776 | 14082.8 |
| gsh-dependent disulfide bond oxidoreductase | EPT01_05030 | Not Available | Negative | 1029833 - 1030480 | 24517.2 |
| glutathione transferase | EPT01_05035 | Not Available | Positive | 1030616 - 1031260 | 24327.0 |
| phosphodiesterase | EPT01_05040 | Not Available | Positive | 1031316 - 1031867 | 19992.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





