Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 52_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1279593 bp
Thymine Count
1283389 bp
Guanine Count
1320483 bp
Cytosine Count
1307343 bp
Genome Length
5200701 bp
Protein-coding Genes
4728 genes
Non-Coding Genes
404 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid permease | EPT01_04230 | Not Available | Positive | 855504 - 856934 | 52499.5 |
| lysr family transcriptional regulator | EPT01_04235 | Not Available | Negative | 856935 - 857843 | 34296.3 |
| nad(p)h oxidoreductase | EPT01_04240 | Not Available | Positive | 857943 - 858533 | 23037.4 |
| pyruvate formate lyase 1-activating protein | EPT01_04245 | Not Available | Negative | 858615 - 859355 | 28205.9 |
| formate c-acetyltransferase | EPT01_04250 | Not Available | Negative | 859547 - 861829 | 85362.0 |
| formate transporter foca | EPT01_04255 | Not Available | Negative | 861884 - 862741 | 31006.6 |
| 30s ribosomal protein s12 methylthiotransferase accessory protein ycao | EPT01_04260 | Not Available | Negative | 863146 - 864906 | 65655.0 |
| duf421 domain-containing protein | EPT01_04265 | Not Available | Positive | 865036 - 865728 | 26283.5 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | EPT01_04270 | Not Available | Positive | 865927 - 867015 | 39785.5 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | EPT01_04275 | Not Available | Positive | 867086 - 868369 | 46098.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





