Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 52_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1279593 bp
Thymine Count
1283389 bp
Guanine Count
1320483 bp
Cytosine Count
1307343 bp
Genome Length
5200701 bp
Protein-coding Genes
4728 genes
Non-Coding Genes
404 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-ribose pyranase | EPT01_04180 | Not Available | Positive | 844722 - 845141 | 15293.4 |
| ribose abc transporter atp-binding protein rbsa | EPT01_04185 | Not Available | Positive | 845149 - 846654 | 55059.1 |
| ribose abc transporter permease | EPT01_04190 | Not Available | Positive | 846659 - 847624 | 33454.0 |
| ribose abc transporter substrate-binding protein rbsb | EPT01_04195 | Not Available | Positive | 847649 - 848539 | 30940.2 |
| ribokinase | EPT01_04200 | Not Available | Positive | 848665 - 849594 | 32292.4 |
| transcriptional regulator rbsr | EPT01_04205 | Not Available | Positive | 849598 - 850590 | 36614.1 |
| dha2 family efflux mfs transporter permease subunit | EPT01_04210 | Not Available | Negative | 850556 - 851983 | 51464.9 |
| fadr family transcriptional regulator | EPT01_04215 | Not Available | Negative | 852006 - 852698 | 26077.5 |
| hydrolase | EPT01_04220 | Not Available | Negative | 853206 - 853832 | 23101.5 |
| mfs transporter | EPT01_04225 | Not Available | Positive | 854146 - 855294 | 41434.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





