Sphingomonas sp. UV9

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas sp. UV9 is characterized as a rod-shaped bacterium that possesses flagella, indicating its motility. This feature allows the organism to navigate its environment effectively, which could be advantageous for colonization and nutrient acquisition. The bacterium has a single replicon, suggesting a streamlined genetic organization that may contribute to its adaptability and efficiency in various ecological niches. The genome of Sphingomonas sp. UV9 is accessible under the accession number SCIN00000000.1, providing a resource for further study and annotation of its genetic features. This genomic information can be vital for understanding its metabolic capabilities, ecological roles, and potential applications in biotechnology or bioremediation. Biologically, the presence of flagella and the rod shape of Sphingomonas sp. UV9 could imply its ability to thrive in diverse environments, potentially including soil, water, or plant-associated habitats. The motility conferred by flagella may facilitate its interactions with other microorganisms and the surrounding environment, which is crucial for nutrient cycling and ecosystem dynamics. Understanding the ecological role of Sphingomonas sp. UV9 could provide insights into microbial community structures and functions, emphasizing the importance of such organisms in maintaining ecological balance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas sp. UV9
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas sp. UV9
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas sp. UV9 NODE_231_length_273_cov_0.0909091, whole

Gene Summary

Adenine Count

732397 bp

Thymine Count

726687 bp

Guanine Count

1392541 bp

Cytosine Count

1400848 bp

Genome Length

4254452 bp

Protein-coding Genes

3727 genes

Non-Coding Genes

128 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthaseEQZ23_14125Not AvailablePositive3052183 - 305331940420.5
abrb/maze/spovt family dna-binding domain-containing proteinEQZ23_14130Not AvailablePositive3053357 - 305365610935.8
twitching motility protein piltEQZ23_14135Not AvailablePositive3053653 - 305403013532.6
dmt family transporterEQZ23_14140Not AvailablePositive3054030 - 305492931343.0
gnat family n-acetyltransferaseEQZ23_14145Not AvailablePositive3054926 - 305540217072.3
inorganic diphosphataseEQZ23_14150Not AvailableNegative3055615 - 305619321443.5
m61 family peptidaseEQZ23_14155Not AvailableNegative3056269 - 305818270251.5
duf1345 domain-containing proteinEQZ23_14160Not AvailableNegative3058265 - 305891523504.7
histidine--trna ligaseEQZ23_14165Not AvailablePositive3058965 - 306020944920.4
peptide chain release factor 1EQZ23_14170Not AvailablePositive3060343 - 306141639321.3

Displaying genes 2801 – 2810 of 3856 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.