Sphingomonas sp. UV9

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas sp. UV9 is characterized as a rod-shaped bacterium that possesses flagella, indicating its motility. This feature allows the organism to navigate its environment effectively, which could be advantageous for colonization and nutrient acquisition. The bacterium has a single replicon, suggesting a streamlined genetic organization that may contribute to its adaptability and efficiency in various ecological niches. The genome of Sphingomonas sp. UV9 is accessible under the accession number SCIN00000000.1, providing a resource for further study and annotation of its genetic features. This genomic information can be vital for understanding its metabolic capabilities, ecological roles, and potential applications in biotechnology or bioremediation. Biologically, the presence of flagella and the rod shape of Sphingomonas sp. UV9 could imply its ability to thrive in diverse environments, potentially including soil, water, or plant-associated habitats. The motility conferred by flagella may facilitate its interactions with other microorganisms and the surrounding environment, which is crucial for nutrient cycling and ecosystem dynamics. Understanding the ecological role of Sphingomonas sp. UV9 could provide insights into microbial community structures and functions, emphasizing the importance of such organisms in maintaining ecological balance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas sp. UV9
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas sp. UV9
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas sp. UV9 NODE_231_length_273_cov_0.0909091, whole

Gene Summary

Adenine Count

732397 bp

Thymine Count

726687 bp

Guanine Count

1392541 bp

Cytosine Count

1400848 bp

Genome Length

4254452 bp

Protein-coding Genes

3727 genes

Non-Coding Genes

128 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptidase s41EQZ23_05460Not AvailablePositive1234034 - 123545249737.3
glutathione s-transferaseEQZ23_05465Not AvailablePositive1235525 - 123619625194.0
succinyl-diaminopimelate desuccinylaseEQZ23_05470Not AvailablePositive1236193 - 123730838953.8
dna mismatch repair protein mutsEQZ23_05475Not AvailableNegative1237470 - 123792215776.3
hypothetical proteinEQZ23_05480Not AvailableNegative1238071 - 123942947113.4
tim44 domain-containing proteinEQZ23_05485Not AvailableNegative1239432 - 124007623162.2
protein-export chaperone secbEQZ23_05490Not AvailablePositive1240244 - 124076518719.0
murein biosynthesis integral membrane protein murjEQZ23_05495Not AvailablePositive1240791 - 124235656046.2
tryptophan--trna ligaseEQZ23_05500Not AvailablePositive1242365 - 124337235935.3
chromosomal replication initiator protein dnaaEQZ23_05505Not AvailableNegative1243608 - 124511355443.6

Displaying genes 1171 – 1180 of 3856 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.