Sphingomonas sp. UV9

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas sp. UV9 is characterized as a rod-shaped bacterium that possesses flagella, indicating its motility. This feature allows the organism to navigate its environment effectively, which could be advantageous for colonization and nutrient acquisition. The bacterium has a single replicon, suggesting a streamlined genetic organization that may contribute to its adaptability and efficiency in various ecological niches. The genome of Sphingomonas sp. UV9 is accessible under the accession number SCIN00000000.1, providing a resource for further study and annotation of its genetic features. This genomic information can be vital for understanding its metabolic capabilities, ecological roles, and potential applications in biotechnology or bioremediation. Biologically, the presence of flagella and the rod shape of Sphingomonas sp. UV9 could imply its ability to thrive in diverse environments, potentially including soil, water, or plant-associated habitats. The motility conferred by flagella may facilitate its interactions with other microorganisms and the surrounding environment, which is crucial for nutrient cycling and ecosystem dynamics. Understanding the ecological role of Sphingomonas sp. UV9 could provide insights into microbial community structures and functions, emphasizing the importance of such organisms in maintaining ecological balance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas sp. UV9
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas sp. UV9
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas sp. UV9 NODE_231_length_273_cov_0.0909091, whole

Gene Summary

Adenine Count

732397 bp

Thymine Count

726687 bp

Guanine Count

1392541 bp

Cytosine Count

1400848 bp

Genome Length

4254452 bp

Protein-coding Genes

3727 genes

Non-Coding Genes

128 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gatb/yqey domain-containing proteinEQZ23_04840Not AvailablePositive1096516 - 109698316827.3
dna primaseEQZ23_04845Not AvailablePositive1097231 - 109909367629.1
rna polymerase sigma factor rpodEQZ23_04850Not AvailablePositive1099093 - 110112676644.8
beta-carotene hydroxylaseEQZ23_04855Not AvailablePositive1101163 - 110173221555.2
beta-carotene ketolaseEQZ23_04860Not AvailablePositive1101746 - 110251928418.6
hypothetical proteinEQZ23_04870Not AvailablePositive1102856 - 110459265208.0
pseudouridine synthaseEQZ23_04875Not AvailablePositive1104740 - 110528220383.6
50s ribosomal protein l19EQZ23_04880Not AvailableNegative1105851 - 110624314477.6
trna (guanosine(37)-n1)-methyltransferase trmdEQZ23_04885Not AvailableNegative1106246 - 110697126333.4
type ii toxin-antitoxin system vapc family toxinEQZ23_04890Not AvailableNegative1106968 - 110735113774.8

Displaying genes 1051 – 1060 of 3856 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.