Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| electron transfer flavoprotein fixa | EQ825_03970 | Not Available | Negative | 807633 - 808403 | 27145.2 |
| l-carnitine/gamma-butyrobetaine antiporter | EQ825_03975 | Not Available | Positive | 808876 - 810390 | 56590.4 |
| crotonobetainyl-coa dehydrogenase | EQ825_03980 | Not Available | Positive | 810421 - 811563 | 42560.8 |
| l-carnitine coa-transferase | EQ825_03985 | Not Available | Positive | 811692 - 812909 | 45071.2 |
| crotonobetaine/carnitine-coa ligase | EQ825_03990 | Not Available | Positive | 812983 - 814536 | 58401.3 |
| carnitinyl-coa dehydratase | EQ825_03995 | Not Available | Positive | 814645 - 815430 | 28191.8 |
| carnitine operon protein caie | EQ825_04000 | Not Available | Positive | 815436 - 816026 | 21233.7 |
| carnitine metabolism transcriptional regulator caif | EQ825_04005 | Not Available | Negative | 816145 - 816540 | 15437.1 |
| carbamoyl-phosphate synthase large subunit | EQ825_04010 | Not Available | Negative | 816802 - 820023 | 117863.0 |
| carbamoyl-phosphate synthase small subunit | EQ825_04015 | Not Available | Negative | 820041 - 821189 | 41433.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





