Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase ii | EQ825_03865 | Not Available | Positive | 784490 - 786841 | 90084.7 |
| rna polymerase-associated protein rapa | EQ825_03870 | Not Available | Positive | 787005 - 789911 | 109845.0 |
| bifunctional trna pseudouridine(32) synthase/23s rrna pseudouridine(746) synthase rlua | EQ825_03875 | Not Available | Positive | 789923 - 790582 | 24862.1 |
| udp pyrophosphate phosphatase | EQ825_03885 | Not Available | Negative | 791000 - 791752 | 28012.7 |
| co-chaperone djla | EQ825_03890 | Not Available | Negative | 792047 - 792862 | 30567.2 |
| lps assembly protein lptd | EQ825_03895 | Not Available | Positive | 793117 - 795486 | 90147.3 |
| peptidylprolyl isomerase sura | EQ825_03900 | Not Available | Positive | 795539 - 796825 | 47286.5 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | EQ825_03905 | Not Available | Positive | 796825 - 797814 | 35256.9 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | EQ825_03910 | Not Available | Positive | 797811 - 798632 | 30422.0 |
| co2+/mg2+ efflux protein apag | EQ825_03915 | Not Available | Positive | 798635 - 799012 | 13867.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





