Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional regulator sgrr | EQ825_03815 | Not Available | Positive | 772104 - 773762 | 64087.8 |
| type iii effector | EQ825_03820 | Not Available | Negative | 773992 - 774561 | 21465.3 |
| thiamine abc transporter substrate binding subunit | EQ825_03825 | Not Available | Positive | 774933 - 775916 | 36165.2 |
| thiamine/thiamine pyrophosphate abc transporter permease thip | EQ825_03830 | Not Available | Positive | 775892 - 777502 | 59222.4 |
| thiamine abc transporter atp-binding protein thiq | EQ825_03835 | Not Available | Positive | 777486 - 778184 | 25030.7 |
| deda family protein | EQ825_03840 | Not Available | Negative | 778271 - 779035 | 28220.7 |
| arabinose operon transcriptional regulator arac | EQ825_03845 | Not Available | Negative | 779121 - 779999 | 33385.8 |
| ribulokinase | EQ825_03850 | Not Available | Positive | 780338 - 782038 | 61134.7 |
| l-arabinose isomerase | EQ825_03855 | Not Available | Positive | 782049 - 783551 | 56078.1 |
| l-ribulose-5-phosphate 4-epimerase | EQ825_03860 | Not Available | Positive | 783720 - 784415 | 25534.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





