Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane usher protein | EQ825_03465 | Not Available | Positive | 694001 - 696601 | 94604.9 |
| fimbrial protein | EQ825_03470 | Not Available | Positive | 696615 - 697163 | 18817.2 |
| fimbrial protein | EQ825_03475 | Not Available | Positive | 697178 - 697789 | 21156.0 |
| fimbrial protein | EQ825_03480 | Not Available | Positive | 697810 - 698400 | 21186.8 |
| fimbrial protein | EQ825_03485 | Not Available | Positive | 698412 - 699524 | 40261.0 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | EQ825_03490 | Not Available | Positive | 699660 - 700451 | 27947.9 |
| pantoate--beta-alanine ligase | EQ825_03495 | Not Available | Positive | 700463 - 701314 | 31597.5 |
| hypothetical protein | EQ825_03500 | Not Available | Negative | 701410 - 701619 | 8236.79 |
| rpn family recombination-promoting nuclease/putative transposase | EQ825_03505 | Not Available | Negative | 701688 - 702560 | 33739.8 |
| aspartate 1-decarboxylase | EQ825_03510 | Not Available | Positive | 702834 - 703214 | 13834.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





