Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional glycosyl transferase/transpeptidase | EQ825_03415 | Not Available | Negative | 682198 - 684732 | 94270.0 |
| atp-dependent helicase hrpb | EQ825_03420 | Not Available | Negative | 684928 - 687357 | 89062.0 |
| rna 2',3'-cyclic phosphodiesterase | EQ825_03425 | Not Available | Positive | 687431 - 687961 | 19981.1 |
| dna/rna nuclease sfsa | EQ825_03430 | Not Available | Positive | 687976 - 688680 | 26230.2 |
| rna polymerase-binding transcription factor dksa | EQ825_03435 | Not Available | Positive | 688858 - 689313 | 17528.7 |
| trna glutamyl-q(34) synthetase gluqrs | EQ825_03440 | Not Available | Positive | 689350 - 690276 | 34849.5 |
| polynucleotide adenylyltransferase pcnb | EQ825_03445 | Not Available | Positive | 690315 - 691733 | 54659.0 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | EQ825_03450 | Not Available | Positive | 691730 - 692209 | 17759.4 |
| fimbrial protein | EQ825_03455 | Not Available | Positive | 692551 - 693147 | 20366.2 |
| fimbrial chaperone | EQ825_03460 | Not Available | Positive | 693234 - 693959 | 26258.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





