Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 32 protein | EQ825_02905 | Not Available | Positive | 575988 - 577421 | 54362.8 |
| laci family dna-binding transcriptional regulator | EQ825_02910 | Not Available | Negative | 577429 - 578424 | 36447.7 |
| d-serine ammonia-lyase | EQ825_02920 | Not Available | Positive | 578891 - 580219 | 47947.4 |
| multidrug efflux mfs transporter permease subunit emry | EQ825_02925 | Not Available | Negative | 580327 - 581865 | 56004.4 |
| multidrug efflux mfs transporter periplasmic adaptor subunit emrk | EQ825_02930 | Not Available | Negative | 581865 - 583028 | 42574.8 |
| acid-sensing system dna-binding response regulator evga | EQ825_02935 | Not Available | Positive | 583444 - 584058 | 22691.5 |
| acid-sensing system histidine kinase evgs | EQ825_02940 | Not Available | Positive | 584063 - 587656 | 134952.0 |
| coa:oxalate coa-transferase | EQ825_02945 | Not Available | Negative | 587712 - 588857 | 41687.2 |
| transporter yfdv | EQ825_02950 | Not Available | Negative | 588931 - 589875 | 33617.9 |
| oxalyl-coa decarboxylase | EQ825_02955 | Not Available | Negative | 589945 - 591639 | 60584.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





