Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iclr family transcriptional regulator | EQ825_02400 | Not Available | Negative | 470029 - 470811 | 28948.9 |
| nicotinamide mononucleotide deamidase-related protein yfay | EQ825_02405 | Not Available | Negative | 471031 - 472233 | 44240.3 |
| hypothetical protein | EQ825_02410 | Not Available | Negative | 472333 - 472875 | 18596.8 |
| nucleoside triphosphatase nudi | EQ825_02415 | Not Available | Positive | 473154 - 473579 | 16371.6 |
| histidine phosphatase family protein | EQ825_02420 | Not Available | Negative | 473618 - 474220 | 22290.8 |
| udp-4-amino-4-deoxy-l-arabinose aminotransferase | EQ825_02425 | Not Available | Positive | 474528 - 475667 | 41643.2 |
| undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferase | EQ825_02430 | Not Available | Positive | 475671 - 476639 | 36341.3 |
| bifunctional udp-4-amino-4-deoxy-l-arabinose formyltransferase/udp-glucuronic acid oxidase arna | EQ825_02435 | Not Available | Positive | 476639 - 478621 | 74228.0 |
| 4-deoxy-4-formamido-l-arabinose- phosphoundecaprenol deformylase | EQ825_02440 | Not Available | Positive | 478618 - 479508 | 33113.6 |
| lipid iv(a) 4-amino-4-deoxy-l-arabinosyltransferase | EQ825_02445 | Not Available | Positive | 479508 - 481160 | 62546.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





