Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| quinol dehydrogenase ferredoxin subunit naph | EQ825_02200 | Not Available | Negative | 411262 - 412125 | 31861.3 |
| ferredoxin-type protein napg | EQ825_02205 | Not Available | Negative | 412112 - 412807 | 24926.1 |
| periplasmic nitrate reductase subunit alpha | EQ825_02210 | Not Available | Negative | 412814 - 415300 | 93061.0 |
| chaperone napd | EQ825_02215 | Not Available | Negative | 415297 - 415560 | 9469.03 |
| ferredoxin-type protein napf | EQ825_02220 | Not Available | Negative | 415550 - 416044 | 18048.3 |
| ecotin | EQ825_02225 | Not Available | Positive | 416451 - 416939 | 18166.0 |
| malate dehydrogenase (quinone) | EQ825_02230 | Not Available | Negative | 417315 - 418961 | 60209.0 |
| microcin j25 efflux abc transporter yoji | EQ825_02235 | Not Available | Negative | 419179 - 420822 | 61570.5 |
| dna oxidative demethylase alkb | EQ825_02240 | Not Available | Negative | 420898 - 421548 | 24064.8 |
| bifunctional dna-binding transcriptional regulator/o6-methylguanine-dna methyltransferase ada | EQ825_02245 | Not Available | Negative | 421548 - 422612 | 39237.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





