Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| laci family transcriptional regulator | EQ825_01720 | Not Available | Negative | 329319 - 330317 | 36151.2 |
| ycjx family protein | EQ825_01725 | Not Available | Positive | 330472 - 331869 | 52625.6 |
| tigr01620 family protein | EQ825_01730 | Not Available | Positive | 331866 - 332927 | 39363.5 |
| transcriptional regulator tyrr | EQ825_01735 | Not Available | Positive | 333075 - 334616 | 57641.5 |
| thiol peroxidase | EQ825_01740 | Not Available | Negative | 334660 - 335166 | 17836.3 |
| l-ala-d/l-glu epimerase | EQ825_01745 | Not Available | Positive | 335285 - 336250 | 34637.9 |
| murein tripeptide amidase mpaa | EQ825_01750 | Not Available | Negative | 336225 - 336953 | 26576.4 |
| sdr family oxidoreductase | EQ825_01755 | Not Available | Negative | 337262 - 337900 | 23315.2 |
| alpha/beta hydrolase | EQ825_01760 | Not Available | Negative | 337918 - 338850 | 34103.5 |
| alpha/beta hydrolase | EQ825_01765 | Not Available | Negative | 338850 - 339770 | 33680.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





