Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system tip protein vgrg | EQ825_26845 | Not Available | Negative | 5372554 - 5373479 | 34995.7 |
| is3 family transposase | EQ825_26850 | Not Available | Positive | 5373480 - 5373835 | 13053.1 |
| is1 family transposase | EQ825_26860 | Not Available | Positive | 5374308 - 5374379 | 2357.77 |
| elongation factor tu | EQ825_26865 | Not Available | Positive | 5374380 - 5375272 | 33080.9 |
| hypothetical protein | EQ825_26870 | Not Available | Negative | 5375273 - 5375724 | 16976.1 |
| hypothetical protein | EQ825_26875 | Not Available | Negative | 5375727 - 5376162 | 16937.1 |
| is6 family transposase | EQ825_26880 | Not Available | Positive | 5376163 - 5376237 | 2724.26 |
| is3-like element is3 family transposase | EQ825_26890 | Not Available | Negative | 5377035 - 5377891 | 33244.8 |
| ant(3'') family aminoglycoside nucleotidyltransferase | EQ825_26895 | Not Available | Negative | 5377892 - 5378004 | 4118.03 |
| trimethoprim-resistant dihydrofolate reductase dfra1 | EQ825_26900 | Not Available | Negative | 5378097 - 5378570 | 17562.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





