Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetracycline efflux mfs transporter tet(a) | EQ825_26485 | Not Available | Positive | 5321446 - 5322645 | 42243.5 |
| eama family transporter | EQ825_26490 | Not Available | Negative | 5322677 - 5323561 | 31150.6 |
| cysteine hydrolase | EQ825_26495 | Not Available | Negative | 5323699 - 5324091 | 14133.7 |
| merr family transcriptional regulator | EQ825_26505 | Not Available | Positive | 5327158 - 5327251 | 2909.43 |
| type iv secretion protein rhs | EQ825_26510 | Not Available | Positive | 5327366 - 5328601 | 44342.5 |
| mafi family immunity protein | EQ825_26515 | Not Available | Positive | 5328598 - 5328870 | 10288.2 |
| hypothetical protein | EQ825_26520 | Not Available | Positive | 5329129 - 5329464 | 13157.4 |
| is6 family transposase | EQ825_26530 | Not Available | Positive | 5329897 - 5329971 | 2724.26 |
| cupin domain-containing protein | EQ825_26535 | Not Available | Negative | 5330042 - 5330416 | 13246.5 |
| hypothetical protein | EQ825_26540 | Not Available | Negative | 5330481 - 5331128 | 23904.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





