Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is91-like element isvsa3 family transposase | EQ825_26430 | Not Available | Negative | 5312734 - 5313968 | 46379.0 |
| lysr family transcriptional regulator | EQ825_26435 | Not Available | Negative | 5314080 - 5314385 | 11133.6 |
| chloramphenicol/florfenicol efflux mfs transporter flor | EQ825_26440 | Not Available | Negative | 5314413 - 5315627 | 42647.3 |
| duf3363 domain-containing protein | EQ825_26445 | Not Available | Negative | 5315844 - 5316557 | 26308.1 |
| rep protein | EQ825_26450 | Not Available | Negative | 5316657 - 5316932 | 9857.92 |
| hypothetical protein | EQ825_26460 | Not Available | Positive | 5317380 - 5317883 | 19042.2 |
| relaxase/mobilization nuclease | EQ825_26465 | Not Available | Negative | 5318002 - 5319702 | 65360.3 |
| hypothetical protein | EQ825_26470 | Not Available | Negative | 5319699 - 5319992 | 10954.3 |
| hypothetical protein | EQ825_26475 | Not Available | Negative | 5319982 - 5320227 | 9181.81 |
| tetr family transcriptional regulator | EQ825_26480 | Not Available | Negative | 5320690 - 5321367 | 24316.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





