Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| stress response membrane protein yncl | EQ825_24955 | Not Available | Positive | 5077580 - 5077675 | 3490.44 |
| aminobutyraldehyde dehydrogenase | EQ825_24960 | Not Available | Negative | 5077772 - 5079196 | 50848.8 |
| abc transporter permease | EQ825_24965 | Not Available | Negative | 5079218 - 5080012 | 28751.6 |
| abc transporter permease | EQ825_24970 | Not Available | Negative | 5080002 - 5080943 | 34367.1 |
| abc transporter atp-binding protein | EQ825_24975 | Not Available | Negative | 5080944 - 5081957 | 37033.9 |
| extracellular solute-binding protein | EQ825_24980 | Not Available | Negative | 5081975 - 5083120 | 42338.4 |
| plp-dependent aminotransferase family protein | EQ825_24985 | Not Available | Negative | 5083365 - 5084771 | 52754.7 |
| type ii toxin-antitoxin system antitoxin hicb | EQ825_24990 | Not Available | Negative | 5084850 - 5085266 | 15247.5 |
| duf2554 family protein | EQ825_25000 | Not Available | Positive | 5085688 - 5085918 | 8709.32 |
| 23s rrna 5-hydroxycytidine c2501 synthase | EQ825_25005 | Not Available | Negative | 5086010 - 5087971 | 72752.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





