Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna pseudouridine(2605) synthase rlub | EQ825_01415 | Not Available | Positive | 265984 - 266856 | 32599.3 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | EQ825_01420 | Not Available | Negative | 266896 - 267486 | 22014.2 |
| ycik family oxidoreductase | EQ825_01425 | Not Available | Negative | 267483 - 268241 | 27977.7 |
| protease sohb | EQ825_01430 | Not Available | Positive | 268461 - 269510 | 39368.7 |
| duf2498 family protein | EQ825_01435 | Not Available | Negative | 269546 - 269797 | 9386.17 |
| type i dna topoisomerase | EQ825_01440 | Not Available | Positive | 270177 - 272774 | 97342.0 |
| hth-type transcriptional regulator cysb | EQ825_01445 | Not Available | Positive | 272984 - 273958 | 36152.5 |
| ymia family putative membrane protein | EQ825_01450 | Not Available | Positive | 274289 - 274417 | 4866.05 |
| hypothetical protein | EQ825_01455 | Not Available | Positive | 274420 - 274587 | 6351.24 |
| hypothetical protein | EQ825_01460 | Not Available | Positive | 274701 - 274796 | 3822.77 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





