Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ssra-binding protein smpb | EQ825_24755 | Not Available | Negative | 5041956 - 5042438 | 18270.1 |
| type ii toxin-antitoxin system rata family toxin | EQ825_24760 | Not Available | Positive | 5042570 - 5043046 | 17743.7 |
| rnfh family protein | EQ825_24765 | Not Available | Positive | 5043036 - 5043326 | 10790.0 |
| outer membrane protein assembly factor bame | EQ825_24770 | Not Available | Negative | 5043388 - 5043729 | 12302.8 |
| dna repair protein recn | EQ825_24775 | Not Available | Negative | 5043878 - 5045539 | 61398.1 |
| nad(+) kinase | EQ825_24780 | Not Available | Negative | 5045625 - 5046503 | 32580.3 |
| molecular chaperone grpe | EQ825_24785 | Not Available | Positive | 5046435 - 5046629 | 7202.78 |
| nucleotide exchange factor grpe | EQ825_24790 | Not Available | Positive | 5046626 - 5047219 | 21813.1 |
| duf21 domain-containing protein | EQ825_24795 | Not Available | Negative | 5047274 - 5048560 | 47995.1 |
| inner membrane protein ypjd | EQ825_24800 | Not Available | Negative | 5048581 - 5049372 | 29263.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





