Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | EQ825_24350 | Not Available | Positive | 4978463 - 4979065 | 22605.6 |
| alpha,alpha-trehalase tref | EQ825_24355 | Not Available | Negative | 4979116 - 4980765 | 63700.1 |
| cytochrome c peroxidase | EQ825_24360 | Not Available | Positive | 4981169 - 4982566 | 51559.3 |
| glutamate decarboxylase | EQ825_24365 | Not Available | Positive | 4982777 - 4983299 | 19937.8 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | EQ825_24370 | Not Available | Positive | 4983895 - 4985484 | 57361.4 |
| phosphoribosylamine--glycine ligase | EQ825_24375 | Not Available | Positive | 4985496 - 4986785 | 45957.0 |
| sigma-54-dependent response regulator transcription factor zrar | EQ825_24380 | Not Available | Negative | 4986782 - 4988107 | 48329.3 |
| two-component system sensor histidine kinase zras | EQ825_24385 | Not Available | Negative | 4988104 - 4989480 | 50520.1 |
| zinc resistance sensor/chaperone zrap | EQ825_24390 | Not Available | Positive | 4989718 - 4990143 | 15200.3 |
| duf1481 domain-containing protein | EQ825_24395 | Not Available | Negative | 4990145 - 4990840 | 26352.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





