Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system-associated protein tago | EQ825_24130 | Not Available | Positive | 4930600 - 4931343 | 26435.7 |
| type vi secretion system protein tssa | EQ825_24135 | Not Available | Positive | 4931348 - 4932760 | 52237.9 |
| type vi secretion system membrane subunit tssm | EQ825_24140 | Not Available | Positive | 4932869 - 4936303 | 130812.0 |
| hypothetical protein | EQ825_24145 | Not Available | Positive | 4936314 - 4937663 | 50808.6 |
| hcp family type vi secretion system effector | EQ825_24150 | Not Available | Positive | 4937690 - 4938169 | 17883.2 |
| peptidoglycan-binding protein | EQ825_24160 | Not Available | Positive | 4938490 - 4939086 | 22562.1 |
| hypothetical protein | EQ825_24165 | Not Available | Positive | 4939089 - 4939538 | 17216.8 |
| hypothetical protein | EQ825_24170 | Not Available | Positive | 4939535 - 4939891 | 14056.9 |
| hypothetical protein | EQ825_24175 | Not Available | Negative | 4940017 - 4940817 | 30040.7 |
| Trna-asp | Not Available | Not Available | Positive | 4941145 - 4941221 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





