Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system contractile sheath small subunit | EQ825_24075 | Not Available | Positive | 4918325 - 4918825 | 18052.4 |
| hypothetical protein | EQ825_24080 | Not Available | Positive | 4918860 - 4919084 | 8411.01 |
| type vi secretion system contractile sheath large subunit | EQ825_24085 | Not Available | Positive | 4919135 - 4920610 | 55705.0 |
| type vi secretion system baseplate subunit tsse | EQ825_24090 | Not Available | Positive | 4920617 - 4921030 | 15493.0 |
| type vi secretion system baseplate subunit tssf | EQ825_24095 | Not Available | Positive | 4921034 - 4922884 | 71222.1 |
| type vi secretion system baseplate subunit tssg | EQ825_24100 | Not Available | Positive | 4922848 - 4923930 | 40262.1 |
| type vi secretion system-associated fha domain protein tagh | EQ825_24105 | Not Available | Positive | 4923955 - 4925235 | 47349.7 |
| type vi secretion system lipoprotein tssj | EQ825_24110 | Not Available | Positive | 4925232 - 4925756 | 19424.0 |
| type vi secretion system baseplate subunit tssk | EQ825_24115 | Not Available | Positive | 4925759 - 4927090 | 49914.7 |
| dotu family type iv/vi secretion system protein | EQ825_24120 | Not Available | Positive | 4927095 - 4927856 | 29390.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





