Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein assembly factor bamc | EQ825_24025 | Not Available | Positive | 4908541 - 4909575 | 36844.5 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | EQ825_24030 | Not Available | Positive | 4909788 - 4910501 | 26996.5 |
| neutral zinc metallopeptidase | EQ825_24035 | Not Available | Positive | 4910669 - 4911532 | 31430.0 |
| trna(met) cytidine acetyltransferase | EQ825_24040 | Not Available | Positive | 4911547 - 4913562 | 74793.5 |
| esterase | EQ825_24045 | Not Available | Positive | 4913636 - 4914334 | 24801.4 |
| ypfn family protein | EQ825_24050 | Not Available | Negative | 4914415 - 4914615 | 8071.78 |
| succinyl-diaminopimelate desuccinylase | EQ825_24055 | Not Available | Negative | 4914643 - 4915770 | 41271.4 |
| arsc family reductase | EQ825_24060 | Not Available | Negative | 4915774 - 4916073 | 11220.4 |
| type vi secretion system tip protein vgrg | EQ825_24065 | Not Available | Negative | 4916147 - 4916900 | 29191.3 |
| hcp family type vi secretion system effector | EQ825_24070 | Not Available | Negative | 4917110 - 4917628 | 19256.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





