Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase dosc | EQ825_23510 | Not Available | Positive | 4800174 - 4801556 | 53180.7 |
| oxygen-sensing cyclic-di-gmp phosphodiesterase | EQ825_23515 | Not Available | Positive | 4801581 - 4803980 | 90243.5 |
| d-alanyl-d-alanine dipeptidase | EQ825_23520 | Not Available | Positive | 4804238 - 4804819 | 21228.2 |
| abc transporter substrate-binding protein | EQ825_23525 | Not Available | Positive | 4804833 - 4806383 | 57628.2 |
| abc transporter permease | EQ825_23530 | Not Available | Positive | 4806385 - 4807407 | 37451.4 |
| d,d-dipeptide abc transporter permease | EQ825_23535 | Not Available | Positive | 4807404 - 4808300 | 31886.8 |
| abc transporter atp-binding protein | EQ825_23540 | Not Available | Positive | 4808297 - 4809283 | 36072.0 |
| atp-binding cassette domain-containing protein | EQ825_23545 | Not Available | Positive | 4809276 - 4810202 | 34667.1 |
| osmc family peroxiredoxin | EQ825_23550 | Not Available | Negative | 4810258 - 4810689 | 15089.0 |
| biofilm-dependent modulation protein | EQ825_23555 | Not Available | Positive | 4811035 - 4811250 | 7988.24 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





