Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| porin | EQ825_23240 | Not Available | Positive | 4733468 - 4734655 | 43139.3 |
| protein deglycase hcha | EQ825_23250 | Not Available | Positive | 4735247 - 4736098 | 31178.1 |
| hamp domain-containing protein | EQ825_23255 | Not Available | Negative | 4736206 - 4737564 | 51046.9 |
| dna-binding response regulator hprr | EQ825_23260 | Not Available | Negative | 4737564 - 4738235 | 25040.2 |
| hydroxyisourate hydrolase | EQ825_23265 | Not Available | Positive | 4738368 - 4738781 | 15537.6 |
| protein-methionine-sulfoxide reductase catalytic subunit msrp | EQ825_23270 | Not Available | Positive | 4738890 - 4739894 | 37413.0 |
| protein-methionine-sulfoxide reductase heme-binding subunit msrq | EQ825_23275 | Not Available | Positive | 4739895 - 4740530 | 24053.6 |
| metal-binding protein zint | EQ825_23280 | Not Available | Positive | 4740766 - 4741437 | 25523.0 |
| cytochrome b | EQ825_23285 | Not Available | Positive | 4741780 - 4742310 | 20338.4 |
| Trna-ser | Not Available | Not Available | Positive | 4742880 - 4742969 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





