Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yaef family permuted papain-like enzyme | EQ825_23035 | Not Available | Negative | 4700825 - 4701649 | 29958.1 |
| proline--trna ligase | EQ825_23040 | Not Available | Negative | 4701702 - 4703420 | 63684.2 |
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | EQ825_23045 | Not Available | Negative | 4703531 - 4704238 | 26423.9 |
| rcs stress response system protein rcsf | EQ825_23050 | Not Available | Negative | 4704235 - 4704639 | 14164.3 |
| methionine abc transporter substrate-binding protein metq | EQ825_23055 | Not Available | Negative | 4704757 - 4705572 | 29419.2 |
| methionine abc transporter | EQ825_23060 | Not Available | Negative | 4705612 - 4706265 | 23257.6 |
| d-methionine abc transporter, atp-binding protein | EQ825_23065 | Not Available | Negative | 4706258 - 4707289 | 37816.7 |
| d-glycero-beta-d-manno-heptose 1,7-bisphosphate 7-phosphatase | EQ825_23070 | Not Available | Positive | 4707477 - 4708052 | 21295.4 |
| transposase | EQ825_23075 | Not Available | Negative | 4708396 - 4708532 | 5409.55 |
| arac family transcriptional regulator | EQ825_23085 | Not Available | Negative | 4709903 - 4710700 | 30762.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





