Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cdar family transcriptional regulator | EQ825_22885 | Not Available | Positive | 4668086 - 4669243 | 43660.1 |
| duf3461 family protein | EQ825_22890 | Not Available | Negative | 4669332 - 4669718 | 15097.0 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | EQ825_22895 | Not Available | Negative | 4670032 - 4670856 | 29865.8 |
| bifunctional uridylyltransferase/uridylyl-removing protein glnd | EQ825_22900 | Not Available | Negative | 4670887 - 4673559 | 102355.0 |
| type i methionyl aminopeptidase | EQ825_22905 | Not Available | Negative | 4673621 - 4674415 | 29332.5 |
| 30s ribosomal protein s2 | EQ825_22910 | Not Available | Positive | 4674783 - 4675508 | 26745.2 |
| elongation factor ts | EQ825_22915 | Not Available | Positive | 4675643 - 4676494 | 30424.7 |
| ump kinase | EQ825_22920 | Not Available | Positive | 4676641 - 4677366 | 25971.9 |
| ribosome recycling factor | EQ825_22925 | Not Available | Positive | 4677516 - 4678073 | 20639.7 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | EQ825_22930 | Not Available | Positive | 4678167 - 4679363 | 43390.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





