Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EQ825_22575 | Not Available | Positive | 4610806 - 4610991 | 7078.29 |
| alpa family transcriptional regulator | EQ825_22585 | Not Available | Positive | 4611804 - 4612082 | 10797.3 |
| hypothetical protein | EQ825_22590 | Not Available | Positive | 4612169 - 4612771 | 23570.4 |
| hypothetical protein | EQ825_22595 | Not Available | Negative | 4612677 - 4612877 | 7139.26 |
| hypothetical protein | EQ825_22600 | Not Available | Positive | 4612808 - 4612993 | 6595.99 |
| duf3987 domain-containing protein | EQ825_22605 | Not Available | Negative | 4613093 - 4614577 | 55746.4 |
| hypothetical protein | EQ825_22610 | Not Available | Negative | 4614772 - 4614951 | 6554.52 |
| gtpase family protein | EQ825_22615 | Not Available | Positive | 4615808 - 4616680 | 32381.7 |
| autotransporter adhesin ag43 | EQ825_22620 | Not Available | Positive | 4617008 - 4620127 | 106786.0 |
| hypothetical protein | EQ825_22625 | Not Available | Positive | 4620248 - 4622764 | 91447.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





