Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EQ825_22505 | Not Available | Negative | 4604605 - 4605141 | 20139.1 |
| hypothetical protein | EQ825_22510 | Not Available | Negative | 4605134 - 4605421 | 10534.7 |
| hypothetical protein | EQ825_22515 | Not Available | Negative | 4605440 - 4605760 | 11356.5 |
| hypothetical protein | EQ825_22520 | Not Available | Positive | 4605983 - 4606585 | 21974.2 |
| is4 family transposase | EQ825_22530 | Not Available | Negative | 4606936 - 4607049 | 4149.05 |
| hypothetical protein | EQ825_22545 | Not Available | Negative | 4608228 - 4608458 | 8558.44 |
| hypothetical protein | EQ825_22550 | Not Available | Negative | 4608458 - 4608832 | 14171.9 |
| hypothetical protein | EQ825_22560 | Not Available | Negative | 4609088 - 4609414 | 12423.8 |
| inovirus gp2 family protein | EQ825_22565 | Not Available | Negative | 4609581 - 4610150 | 21787.2 |
| hypothetical protein | EQ825_22570 | Not Available | Positive | 4610354 - 4610554 | 7298.14 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





